STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2516PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mrd:Mrad2831_5414 glyoxalase/bleomycin resistance protein/dioxygenase. (333 aa)    
Predicted Functional Partners:
Slin_2515
PFAM: glucose-methanol-choline oxidoreductase; KEGG: mrd:Mrad2831_2394 glucose-methanol-choline oxidoreductase.
 
    0.912
Slin_2523
PFAM: major intrinsic protein; KEGG: bid:Bind_3485 major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
   
 0.628
Slin_2517
PFAM: YHS domain protein; KEGG: sde:Sde_3840 hypothetical protein.
       0.613
Slin_2519
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: xcv:XCV4353 gluconolactonase precursor.
    0.607
Slin_2514
KEGG: rec:RHECIAT_CH0000673 hypothetical protein.
       0.569
Slin_2919
PFAM: glycosyl transferase family 2; KEGG: rpd:RPD_0578 glycosyl transferase family protein.
  
    0.563
Slin_2518
PFAM: protein of unknown function DUF336; KEGG: eci:UTI89_C3393 hypothetical protein.
 
     0.480
Slin_2922
PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: mpo:Mpop_0138 cyclic nucleotide-binding protein.
  
  
 0.425
Slin_4550
PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor.
  
     0.420
Slin_2521
KEGG: sfu:Sfum_0673 hypothetical protein.
 
 
   0.415
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.