STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2528Hypothetical protein. (268 aa)    
Predicted Functional Partners:
Slin_2526
PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ferric reductase domain protein transmembrane component domain; KEGG: msl:Msil_3755 Rieske (2Fe-2S) domain protein.
       0.647
Slin_2524
Hypothetical protein.
       0.633
Slin_2527
Hypothetical protein.
       0.632
Slin_2525
Hypothetical protein.
       0.620
Slin_2523
PFAM: major intrinsic protein; KEGG: bid:Bind_3485 major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.559
Slin_2522
TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; KEGG: scl:sce2296 4-alpha-glucanotransferase.
       0.541
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.