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Slin_2541 protein (Spirosoma linguale) - STRING interaction network
"Slin_2541" - Alpha amylase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2541Alpha amylase (467 aa)    
Predicted Functional Partners:
Slin_5282
Malto-oligosyltrehalose synthase (1411 aa)
   
    0.925
Slin_3112
Malto-oligosyltrehalose synthase (935 aa)
 
   
    0.919
Slin_5124
4-alpha-glucanotransferase (525 aa)
   
    0.917
Slin_3551
Alpha-glucan phosphorylase (567 aa)
   
   
    0.913
Slin_2540
Ribulose-phosphate 3-epimerase (223 aa)
              0.712
Slin_1089
Major facilitator superfamily protein (509 aa)
 
          0.665
Slin_2542
OmpA/MotB domain-containing protein (704 aa)
              0.576
Slin_2543
Hypothetical protein (607 aa)
              0.507
Slin_0058
Glycoside hydrolase (693 aa)
 
          0.472
Slin_2877
Beta-phosphoglucomutase (219 aa)
 
          0.429
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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