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Slin_2571 protein (Spirosoma linguale) - STRING interaction network
"Slin_2571" - ABC transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2571ABC transporter (419 aa)    
Predicted Functional Partners:
Slin_2570
ABC transporter (279 aa)
 
  0.992
Slin_2464
ABC transporter (286 aa)
 
  0.981
Slin_2463
ABC transporter (431 aa)
   
   
 
0.811
Slin_2572
DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)
         
  0.763
Slin_2568
Ligand-binding protein (812 aa)
   
   
  0.733
Slin_2582
Group 1 glycosyl transferase (369 aa)
 
 
  0.708
Slin_2580
Family 2 glycosyl transferase (341 aa)
 
     
  0.674
Slin_6507
Group 1 glycosyl transferase (356 aa)
 
 
  0.672
Slin_4813
dTDP-4-dehydrorhamnose 3,5-epimerase (173 aa)
 
   
  0.664
Slin_0799
ABC transporter (353 aa)
         
0.661
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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