STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2590PFAM: glycosyl transferase family 2; KEGG: bra:BRADO2209 putative glycosyl transferase, group 2 family protein. (310 aa)    
Predicted Functional Partners:
Slin_2591
KEGG: rsp:RSP_7375 putative colanic acid biosynthesis acetyltransferase WcaF.
 
    0.842
Slin_2592
PFAM: glycosyl transferase family 2; KEGG: rma:Rmag_0889 glycosyl transferase family protein.
 
     0.834
Slin_2586
PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_2096 glycosyltransferase.
    0.637
Slin_6297
PFAM: glycosyl transferase group 1; KEGG: pna:Pnap_3183 glycosyl transferase, group 1.
 
    0.582
Slin_2589
PFAM: protein of unknown function DUF303 acetylesterase putative; KEGG: gur:Gura_2036 fibronectin, type III domain- containing protein.
       0.531
Slin_2593
PFAM: Glycosyl transferase, family 4, conserved region; KEGG: geo:Geob_2139 phospho-N-acetylmuramoyl- pentapeptide-transferase.
  
  
 0.483
Slin_2588
PFAM: formyl transferase domain protein; KEGG: gme:Gmet_2025 formyl transferase-like.
  
  
 0.469
Slin_4073
PFAM: glycosyl transferase group 1; KEGG: rsp:RSP_4093 glycosyl transferase, group 1.
 
    0.461
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.