STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2668SMART: Tetratricopeptide repeat; KEGG: mxa:MXAN_5661 putative BatC protein. (230 aa)    
Predicted Functional Partners:
Slin_2671
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: structure-specific recognition protein, putative; K09272 structure-specific recognition protein 1.
 
    0.854
Slin_2667
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dps:DP0639 hypothetical protein.
 
     0.799
Slin_5689
Hypothetical protein; KEGG: sbm:Shew185_0960 MORN repeat-containing protein.
  
   0.786
Slin_5122
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: ppd:Ppro_1078 TPR repeat-containing protein.
 
   0.769
Slin_6106
Hypothetical protein.
  
     0.769
Slin_0996
Hypothetical protein; KEGG: nis:NIS_1418 glycosyl transferase.
  
     0.766
Slin_5161
KEGG: bpm:BURPS1710b_1566 hypothetical protein.
  
     0.766
Slin_5175
KEGG: hha:Hhal_1866 hypothetical protein.
  
     0.765
Slin_6326
Hypothetical protein.
  
     0.758
Slin_6184
Hypothetical protein.
  
     0.755
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.