STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2710PFAM: peptidase M50; KEGG: scl:sce1715 integral membrane protease. (388 aa)    
Predicted Functional Partners:
Slin_5349
Hypothetical protein.
  
     0.758
Slin_0279
PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: hypothetical protein.
  
    0.745
Slin_5689
Hypothetical protein; KEGG: sbm:Shew185_0960 MORN repeat-containing protein.
  
     0.737
Slin_3534
Conserved hypothetical protein, conserved.
  
     0.726
Slin_0020
Hypothetical protein.
  
     0.723
Slin_4433
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.715
Slin_6184
Hypothetical protein.
  
     0.704
Slin_6106
Hypothetical protein.
  
     0.692
Slin_2395
PFAM: phosphatidate cytidylyltransferase; KEGG: ilo:IL0840 CDP-diglyceride synthetase; Belongs to the CDS family.
 
    0.689
Slin_6329
Hypothetical protein.
  
     0.687
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.