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Slin_2814 protein (Spirosoma linguale) - STRING interaction network
"Slin_2814" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2814Hypothetical protein (1224 aa)    
Predicted Functional Partners:
Slin_2813
Metal dependent phosphohydrolase (414 aa)
 
          0.966
Slin_2866
Hypothetical protein (277 aa)
 
          0.754
Slin_4939
Hypothetical protein (360 aa)
   
          0.744
Slin_4561
TonB-dependent receptor (824 aa)
   
          0.675
Slin_1271
Crp/Fnr family transcriptional regulator (350 aa)
   
          0.651
Slin_1346
Hypothetical protein (384 aa)
   
          0.650
Slin_3158
Hypothetical protein (857 aa)
   
          0.604
Slin_4564
Hypothetical protein (171 aa)
   
          0.603
Slin_3553
Crp/Fnr family transcriptional regulator (348 aa)
   
          0.599
Slin_3817
NmrA family protein (297 aa)
   
          0.592
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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