STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2836Hypothetical protein; KEGG: ent:Ent638_3433 glycosy hydrolase family protein. (469 aa)    
Predicted Functional Partners:
Slin_2838
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr3057 3-ketoacyl-(acyl-carrier-protein) reductase.
 
     0.921
Slin_2837
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: dds:Ddes_1649 NADH:flavin oxidoreductase/NADH oxidase.
 
     0.798
Slin_6608
Two component regulator propeller domain protein; KEGG: hypothetical protein.
  
     0.630
Slin_6339
PFAM: FG-GAP repeat protein; KEGG: scl:sce5734 esterases.
  
     0.597
Slin_0958
PFAM: protein of unknown function DUF1501; KEGG: pat:Patl_0814 twin-arginine translocation pathway signal.
  
     0.577
Slin_0957
PFAM: protein of unknown function DUF1549; KEGG: pat:Patl_0817 hypothetical protein.
  
     0.540
Slin_1069
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
     0.531
Slin_0968
KEGG: esa:ESA_01679 hypothetical protein.
  
     0.530
Slin_2839
PFAM: oxidoreductase domain protein; KEGG: sbp:Sbal223_1564 oxidoreductase domain protein.
 
     0.510
Slin_2389
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rle:pRL100283 hypothetical protein.
 
    0.481
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.