STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2839PFAM: oxidoreductase domain protein; KEGG: sbp:Sbal223_1564 oxidoreductase domain protein. (434 aa)    
Predicted Functional Partners:
Slin_0438
PFAM: protein of unknown function DUF1080; KEGG: pzu:PHZ_c2159 hypothetical protein.
 
     0.722
Slin_6569
PFAM: protein of unknown function DUF1080; KEGG: swd:Swoo_0366 hypothetical protein.
 
     0.708
Slin_3462
PFAM: protein of unknown function DUF1080; KEGG: swd:Swoo_0366 hypothetical protein.
 
     0.679
Slin_3047
PFAM: protein of unknown function DUF1080; KEGG: swd:Swoo_0366 hypothetical protein.
  
     0.677
Slin_4651
PFAM: protein of unknown function DUF1080; KEGG: pzu:PHZ_c2159 hypothetical protein.
 
     0.675
Slin_2837
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: dds:Ddes_1649 NADH:flavin oxidoreductase/NADH oxidase.
 
     0.631
Slin_6337
PFAM: protein of unknown function DUF1080.
  
     0.622
Slin_0591
Hypothetical protein; KEGG: xca:xccb100_4096 putative secreted protein.
  
     0.615
Slin_2389
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rle:pRL100283 hypothetical protein.
  
    0.566
Slin_4869
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pmr:PMI3426 sugare isomerase.
 
    0.552
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.