STRINGSTRING
Slin_2899 protein (Spirosoma linguale) - STRING interaction network
"Slin_2899" - Kelch repeat-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2899Kelch repeat-containing protein (321 aa)    
Predicted Functional Partners:
Slin_5725
Hypothetical protein (198 aa)
 
          0.739
Slin_1262
Dehydrogenase (1068 aa)
   
          0.684
Slin_2898
Hypothetical protein (299 aa)
              0.671
Slin_2897
Hypothetical protein (390 aa)
              0.671
Slin_2900
Catalase (550 aa)
              0.616
Slin_3038
Hypothetical protein (524 aa)
   
          0.518
Slin_2896
Hypothetical protein (193 aa)
              0.514
Slin_1825
Hypothetical protein (411 aa)
   
          0.482
Slin_6210
Heme-binding protein (1141 aa)
   
          0.468
Slin_0511
Dehydrogenase (1265 aa)
   
          0.461
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]