STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2939PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: nis:NIS_0400 AAA family ATPase. (325 aa)    
Predicted Functional Partners:
Slin_6105
KEGG: mxa:MXAN_5665 hypothetical protein.
 
  
 0.826
Slin_6107
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: hypothetical protein.
 
  
 0.768
Slin_1323
PFAM: protein of unknown function DUF58; KEGG: pat:Patl_3494 hypothetical protein.
 
  
 0.767
Slin_2667
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dps:DP0639 hypothetical protein.
 
   
 0.715
Slin_4278
KEGG: afw:Anae109_4421 hypothetical protein.
 
  
 0.673
Slin_2938
TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: gme:Gmet_0381 modification methylase HemK.
     
 0.642
Slin_2940
KEGG: geo:Geob_0673 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B.
       0.586
Slin_2937
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.418
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.