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Slin_2939 protein (Spirosoma linguale) - STRING interaction network
"Slin_2939" - ATPase AAA in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2939ATPase AAA (325 aa)    
Predicted Functional Partners:
Slin_6105
Hypothetical protein (287 aa)
 
   
  0.866
Slin_6107
Von Willebrand factor A (359 aa)
 
        0.836
Slin_2667
Von Willebrand factor A (320 aa)
 
        0.829
Slin_1323
Hypothetical protein (283 aa)
 
     
  0.728
Slin_2938
HemK family modification methylase (282 aa)
              0.681
Slin_2940
methionine-R-sulfoxide reductase (170 aa)
              0.659
Slin_4278
Hypothetical protein (303 aa)
 
     
  0.649
Slin_2937
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (352 aa)
              0.460
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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