STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2950PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: dat:HRM2_03620 AlgI1; Belongs to the membrane-bound acyltransferase family. (510 aa)    
Predicted Functional Partners:
Slin_5462
Hypothetical protein; KEGG: rpt:Rpal_2847 alginate O-acetyltransferase AlgJ.
 
     0.735
Slin_2816
PFAM: phosphopantetheine-binding; KEGG: rsq:Rsph17025_1070 acyl carrier protein.
  
 
 0.692
Slin_3191
KEGG: sat:SYN_01693 acyl carrier protein.
  
 
 0.692
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.692
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.692
Slin_2951
KEGG: met:M446_0943 glycosyl transferase family protein.
   
   0.532
Slin_2952
KEGG: geo:Geob_0317 glycosyl transferase family 2.
   
   0.474
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.