STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2951KEGG: met:M446_0943 glycosyl transferase family protein. (322 aa)    
Predicted Functional Partners:
Slin_0291
PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_3309 glycosyl transferase family 2.
  
     0.772
Slin_2952
KEGG: geo:Geob_0317 glycosyl transferase family 2.
 
    
0.772
Slin_2410
PFAM: glycosyl transferase family 2; KEGG: scl:sce7385 undecaprenol glycosyltransferase.
  
     0.738
Slin_6420
PFAM: glycosyl transferase family 2; KEGG: nis:NIS_1112 glycosyl transferase.
  
     0.726
Slin_2950
PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: dat:HRM2_03620 AlgI1; Belongs to the membrane-bound acyltransferase family.
   
   0.532
Slin_2954
KEGG: dat:HRM2_29890 hypothetical protein.
 
     0.482
Slin_2543
Membrane protein-like protein; KEGG: dal:Dalk_2331 hypothetical protein.
 
     0.464
Slin_2546
PFAM: glycosyl transferase family 2; KEGG: dol:Dole_1868 glycosyl transferase family protein.
  
     0.460
Slin_5177
PFAM: glycosyl transferase family 2; KEGG: hypothetical protein; K00721 dolichol- phosphate mannosyltransferase.
 
     0.409
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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