STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2972Hypothetical protein. (325 aa)    
Predicted Functional Partners:
Slin_2970
SMART: protein phosphatase 2C domain protein; KEGG: nmu:Nmul_A1997 protein serine/threonine phosphatase.
       0.781
Slin_2969
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: sit:TM1040_0843 OmpA/MotB.
       0.773
Slin_2971
Hypothetical protein.
       0.773
Slin_2968
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mitogen-activated protein kinase kinase 2; K06228 fused.
       0.668
Slin_2967
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: stress-inducible protein, putative; K09553 stress-induced-phosphoprotein 1.
       0.663
Slin_2973
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: tgr:Tgr7_2548 FHA-domain containing protein.
       0.569
Slin_2966
PFAM: PKD domain containing protein; Fibronectin type III domain protein; SMART: PKD domain containing protein; KEGG: gur:Gura_3011 LamG domain-containing protein.
       0.468
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.