STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2978KEGG: eca:ECA3785 hypothetical protein. (360 aa)    
Predicted Functional Partners:
Slin_2979
KEGG: xac:XAC3596 hypothetical protein.
       0.664
Slin_6214
PFAM: oxidoreductase domain protein; KEGG: bcs:BCAN_A2095 hypothetical protein.
  
     0.595
Slin_0115
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rhi:NGR_b19930 putative sugar phosphate isomerase/epimerase.
  
     0.583
Slin_0604
PFAM: oxidoreductase domain protein; KEGG: ade:Adeh_1063 oxidoreductase-like protein.
  
     0.536
Slin_3972
KEGG: atc:AGR_L_1216 hypothetical protein.
  
    0.496
Slin_0602
KEGG: cak:Caul_0966 hypothetical protein.
  
     0.490
Slin_0417
PFAM: Protein of unknown function DUF2261, transmembrane; KEGG: son:SO_3504 hypothetical protein.
  
     0.466
Slin_2260
KEGG: hypothetical protein.
  
     0.447
Slin_4869
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pmr:PMI3426 sugare isomerase.
  
     0.431
Slin_5622
PFAM: Acetyl xylan esterase; KEGG: yps:YPTB0305 hypothetical protein.
 
     0.410
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.