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Slin_3013 protein (Spirosoma linguale) - STRING interaction network
"Slin_3013" - uroporphyrin-III C/tetrapyrrole methyltransferase in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3013uroporphyrin-III C/tetrapyrrole methyltransferase (233 aa)    
Predicted Functional Partners:
Slin_0478
Siroheme synthase (188 aa)
       
    0.900
Slin_6089
DNA polymerase III gamma/tau subunits-like protein (371 aa)
 
        0.691
Slin_3014
Beta-lactamase (213 aa)
              0.674
Slin_1744
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (252 aa)
 
 
  0.659
Slin_3012
Alpha/beta hydrolase fold protein (257 aa)
   
        0.651
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (271 aa)
   
   
  0.626
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (359 aa)
              0.621
Slin_3136
TrmH family RNA methyltransferase (276 aa)
 
   
  0.618
Slin_0785
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (252 aa)
 
 
  0.617
Slin_2234
TatD family hydrolase (268 aa)
 
     
  0.593
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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