STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tal-2Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (221 aa)    
Predicted Functional Partners:
Slin_2594
TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: pna:Pnap_4499 transketolase; Belongs to the transketolase family.
  
 0.986
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: dal:Dalk_1023 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.964
Slin_0976
PFAM: Transketolase domain protein; KEGG: gme:Gmet_0551 transketolase subunit A.
 
  
 0.943
Slin_0254
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.942
Slin_3541
TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; hydroxyethylthiazole kinase; KEGG: gbm:Gbem_3234 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
 
 0.936
Slin_0975
PFAM: Transketolase central region; Transketolase domain protein; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit.
 
 
 0.934
fbp
PFAM: Inositol phosphatase/fructose-16- bisphosphatase; KEGG: vsp:VS_2771 fructose-1,6-bisphosphatase.
  
 
 0.925
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 
 0.918
Slin_4419
Deoxyribose-phosphate aldolase/phospho-2-dehydro- 3-deoxyheptonate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
 0.918
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
  
 
0.901
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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