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Slin_3045 protein (Spirosoma linguale) - STRING interaction network
"Slin_3045" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3045Hypothetical protein (273 aa)    
Predicted Functional Partners:
Slin_3043
Peptidoglycan-binding lysin domain-containing protein (399 aa)
              0.807
Slin_3044
Hypothetical protein (70 aa)
              0.796
Slin_4054
Cold-shock DNA-binding domain-containing protein (148 aa)
   
          0.636
Slin_4905
Gliding-associated ABC transporter substrate-binding protein GldG (555 aa)
   
          0.608
Slin_4280
Hypothetical protein (108 aa)
   
          0.562
Slin_0008
Hypothetical protein (263 aa)
   
          0.549
Slin_1741
Hypothetical protein (977 aa)
   
          0.489
Slin_5969
Gliding motility-associated lipoprotein GldH (158 aa)
   
          0.481
Slin_4879
Hypothetical protein (170 aa)
   
          0.470
Slin_4895
Gliding motility-associated lipoprotein GldD (195 aa)
   
          0.461
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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