STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3100Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pat:Patl_4154 multi-sensor signal transduction histidine kinase. (573 aa)    
Predicted Functional Partners:
Slin_4374
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: amc:MADE_01274 putative two-component response regulator.
 
 
   0.798
Slin_2170
PFAM: response regulator receiver; KEGG: sfu:Sfum_2731 response regulator receiver protein.
  
 
   0.795
Slin_5266
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gbm:Gbem_0149 response regulator receiver protein.
  
 
   0.795
Slin_0384
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gsu:GSU3261 response regulator.
 
 
   0.793
Slin_0100
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ppd:Ppro_3011 response regulator receiver protein.
 
 
   0.786
Slin_1229
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pat:Patl_4153 response regulator receiver protein.
 
 
   0.785
Slin_0753
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: amc:MADE_01274 putative two-component response regulator.
 
     0.781
Slin_5222
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sfu:Sfum_2731 response regulator receiver protein.
 
 
   0.781
Slin_4953
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: geo:Geob_3575 response regulator receiver protein.
  
 
   0.777
Slin_1993
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0829 response regulator receiver protein.
 
   
 0.773
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.