STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3105PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A1782 glycosyltransferase. (328 aa)    
Predicted Functional Partners:
Slin_3111
PFAM: glycosyl transferase family 9; KEGG: nmu:Nmul_A1783 glycosyl transferase family protein.
    0.924
Slin_3106
PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A1795 phosphoheptose isomerase.
 
     0.880
Slin_3108
PFAM: glycosyl transferase family 9; KEGG: nmu:Nmul_A1791 glycosyl transferase family protein.
    0.869
Slin_3107
TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: azo:azo1807 heptose phosphatase.
 
   
 0.857
Slin_3110
PFAM: glycosyl transferase family 2; KEGG: bph:Bphy_5246 glycosyl transferase family protein.
 
    0.783
Slin_3109
PFAM: Carbamoyltransferase; KEGG: rpi:Rpic_4884 carbamoyltransferase.
 
   
 0.723
Slin_5206
PFAM: glycosyl transferase family 9; KEGG: nam:NAMH_1661 heptosyltransferase family.
  
    0.704
Slin_4160
PFAM: glycosyl transferase family 2; KEGG: cti:RALTA_A0580 putative glycosyl transferase, family 2.
  
    0.631
Slin_3104
Response regulator receiver protein; KEGG: hch:HCH_02559 FOG: CheY-like receiver.
 
     0.575
Slin_4131
PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: mno:Mnod_3478 hypothetical protein.
  
     0.573
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.