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Slin_3105 protein (Spirosoma linguale) - STRING interaction network
"Slin_3105" - Group 1 glycosyl transferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3105Group 1 glycosyl transferase (328 aa)    
Predicted Functional Partners:
Slin_3108
Glycosyl transferase family protein (358 aa)
 
          0.905
Slin_3111
Glycosyl transferase family protein (356 aa)
 
          0.899
Slin_3107
Histidinol-phosphate phosphatase (199 aa)
 
          0.892
Slin_3106
Group 1 glycosyl transferase (435 aa)
 
          0.887
Slin_3110
Family 2 glycosyl transferase (325 aa)
 
          0.874
Slin_3109
Carbamoyltransferase (606 aa)
 
          0.861
Slin_5206
Glycosyl transferase family protein (401 aa)
 
          0.833
Slin_4160
Family 2 glycosyl transferase (289 aa)
   
          0.764
Slin_3104
Response regulator receiver protein (272 aa)
              0.574
Slin_2563
Sugar isomerase (185 aa)
 
          0.556
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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