STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3203Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ccs:CCNA_01282 gluconolactonase. (342 aa)    
Predicted Functional Partners:
Slin_0076
PFAM: SMP-30/Gluconolaconase/LRE domain protein; Arylesterase; KEGG: kpn:KPN_03982 putative outer membrane protein; gluconolactonase.
  
  
 
0.927
Slin_3953
KEGG: mpt:Mpe_A1594 glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; cytochrome c class I; SMART: Pyrrolo-quinoline quinone beta-propeller repeat.
  
  
 0.919
Slin_1132
PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; cytochrome c class I; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; KEGG: bam:Bamb_5932 quinate/shikimate dehydrogenase, putative.
 
  
 0.917
Slin_2450
PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; KEGG: spe:Spro_4849 pyrrolo-quinoline quinone.
  
  
 0.917
Slin_2519
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: xcv:XCV4353 gluconolactonase precursor.
  
  
 
0.912
Slin_0411
PFAM: Carbohydrate kinase, FGGY-like; KEGG: sugar kinase; K00851 gluconokinase.
  
 
 0.904
Slin_1831
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: tgr:Tgr7_0904 short-chain dehydrogenase/reductase SDR.
   
 
  0.900
Slin_2303
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0443 glucose 1-dehydrogenase.
   
 
  0.900
Slin_2520
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0443 glucose 1-dehydrogenase.
   
 
  0.900
Slin_5468
KEGG: bxe:Bxe_C1287 hypothetical protein.
     
  0.900
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.