STRINGSTRING
Slin_3203 protein (Spirosoma linguale) - STRING interaction network
"Slin_3203" - Gluconolactonase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3203Gluconolactonase (342 aa)    
Predicted Functional Partners:
Slin_2303
Short-chain dehydrogenase/reductase SDR (269 aa)
 
 
  0.922
Slin_2520
Short-chain dehydrogenase/reductase SDR (271 aa)
 
 
  0.921
Slin_3953
Quinoprotein glucose dehydrogenase (747 aa)
     
 
  0.911
Slin_2450
PQQ-dependent enzyme-like protein (718 aa)
     
 
  0.911
Slin_1132
PQQ-dependent enzyme-like protein (701 aa)
     
 
  0.911
Slin_1591
Glucose/sorbosone dehydrogenase (414 aa)
 
     
    0.910
Slin_0411
Carbohydrate kinase (495 aa)
   
 
    0.907
Slin_1830
Glucose/sorbosone dehydrogenase (442 aa)
 
     
    0.905
Slin_5469
Gluconate 2-dehydrogenase (acceptor) (526 aa)
   
 
    0.904
Slin_3966
Glucose/sorbosone dehydrogenase (601 aa)
         
    0.900
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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