STRINGSTRING
Slin_3208 protein (Spirosoma linguale) - STRING interaction network
"Slin_3208" - TonB-dependent receptor plug in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3208TonB-dependent receptor plug (823 aa)    
Predicted Functional Partners:
Slin_2732
Hypothetical protein (449 aa)
   
          0.685
Slin_1130
PDZ/DHR/GLGF domain-containing protein (789 aa)
   
          0.681
Slin_3209
Hypothetical protein (219 aa)
              0.646
Slin_1525
Hypothetical protein (855 aa)
   
          0.638
Slin_4961
Hypothetical protein (257 aa)
   
          0.634
Slin_4962
Hypothetical protein (398 aa)
   
          0.633
Slin_0505
Hypothetical protein (224 aa)
   
          0.629
Slin_2733
Hypothetical protein (570 aa)
   
          0.606
Slin_2661
Hypothetical protein (792 aa)
   
          0.604
Slin_5616
Hypothetical protein (451 aa)
   
          0.599
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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