STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3362Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family. (346 aa)    
Predicted Functional Partners:
Slin_3901
KEGG: ret:RHE_PB00090 proline iminopeptidase protein; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold.
  
  
 
0.902
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.901
Slin_0894
PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: prw:PsycPRwf_1859 procollagen-proline dioxygenase.
     
  0.900
Slin_5730
PFAM: Proline dehydrogenase; KEGG: proline oxidase, mitochondrial precursor.
     
  0.900
Slin_3361
PFAM: putative esterase; KEGG: cak:Caul_2411 putative esterase.
     
 0.665
Slin_3898
KEGG: mlo:mlr2180 hypothetical protein.
  
     0.446
Slin_3363
PFAM: Cupin 2 conserved barrel domain protein; KEGG: rle:RL3059 hypothetical protein.
  
    0.433
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.