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kduI protein (Spirosoma linguale) - STRING interaction network
"kduI" - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kduI4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (286 aa)    
Predicted Functional Partners:
Slin_3404
Short-chain dehydrogenase/reductase SDR (257 aa)
 
  0.993
Slin_1024
Glycoside hydrolase family protein (644 aa)
 
          0.845
Slin_1247
Mannitol dehydrogenase domain-containing protein (525 aa)
 
     
  0.816
Slin_1056
Mannitol dehydrogenase domain-containing protein (513 aa)
 
     
  0.815
Slin_1019
Glycoside hydrolase family protein (393 aa)
 
          0.810
Slin_0551
Glycoside hydrolase family protein (397 aa)
 
          0.805
Slin_1253
Glycoside hydrolase family protein (544 aa)
 
          0.760
Slin_4784
Glycoside hydrolase family protein (551 aa)
 
          0.759
Slin_0456
Glycoside hydrolase family protein (462 aa)
 
          0.721
Slin_0416
Altronate dehydratase (582 aa)
 
     
  0.704
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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