STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3411KEGG: cjr:CJE0031 type II restriction-modification enzyme. (247 aa)    
Predicted Functional Partners:
Slin_4844
Hypothetical protein; KEGG: aby:p3ABAYE0070 putative ATPase-like protein.
  
  
 0.789
Slin_4849
KEGG: dvu:DVU2019 hypothetical protein.
  
  
 0.749
Slin_3414
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: sfu:Sfum_0411 helicase domain protein.
 
    0.714
Slin_0279
PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: hypothetical protein.
  
  
 0.699
Slin_1141
KEGG: hhe:HH0800 hypothetical protein.
 
  
 0.696
Slin_3380
SMART: AAA ATPase; KEGG: mxa:MXAN_5972 putative DNA helicase.
  
    0.679
Slin_5757
Superfamily I DNA and RNA helicase and helicase subunits-like protein; KEGG: mxa:MXAN_0520 hypothetical protein.
  
    0.679
Slin_5319
Hypothetical protein; KEGG: sea:SeAg_B4815 restriction endonuclease.
  
    0.653
Slin_3410
PFAM: Resolvase domain; KEGG: dat:HRM2_p00370 DNA-invertase.
 
    0.640
Slin_1472
ATPase-like protein; KEGG: ppd:Ppro_0539 SMC domain-containing protein.
  
  
 0.616
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.