STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3417Esterase; KEGG: scl:sce5734 esterases. (379 aa)    
Predicted Functional Partners:
Slin_0958
PFAM: protein of unknown function DUF1501; KEGG: pat:Patl_0814 twin-arginine translocation pathway signal.
  
     0.767
Slin_0957
PFAM: protein of unknown function DUF1549; KEGG: pat:Patl_0817 hypothetical protein.
  
     0.764
Slin_0969
PFAM: Xylose isomerase domain protein TIM barrel.
  
     0.758
Slin_0965
TIGRFAM: heme-binding protein; KEGG: pca:Pcar_0624 L-sorbosone dehydrogenase.
  
     0.750
Slin_6252
TIGRFAM: heme-binding protein; KEGG: pca:Pcar_0624 L-sorbosone dehydrogenase.
  
     0.701
Slin_0431
Hypothetical protein.
  
     0.687
Slin_0966
PFAM: protein of unknown function DUF1080.
  
     0.681
Slin_1261
Hypothetical protein.
  
     0.668
Slin_0963
PFAM: RagB/SusD domain protein.
  
     0.650
Slin_0970
PFAM: oxidoreductase domain protein; KEGG: rlt:Rleg2_4779 oxidoreductase domain protein.
  
     0.636
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.