STRINGSTRING
Slin_3448 protein (Spirosoma linguale) - STRING interaction network
"Slin_3448" - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3448Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (321 aa)    
Predicted Functional Partners:
Slin_3447
Phospholipid/glycerol acyltransferase (188 aa)
   
        0.746
Slin_0810
Agmatine deiminase (353 aa)
     
  0.659
Slin_1825
Hypothetical protein (411 aa)
   
          0.547
Slin_0869
RagB/SusD domain-containing protein (503 aa)
   
          0.496
sucC
succinyl-CoA synthetase subunit beta (405 aa)
   
      0.488
Slin_5789
Xylose isomerase (285 aa)
   
          0.482
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
         
  0.475
Slin_2325
AraC family transcriptional regulator (249 aa)
   
          0.472
Slin_0632
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (505 aa)
   
   
  0.469
Slin_1885
Hypothetical protein (440 aa)
   
          0.463
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]