STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3560PFAM: cytochrome c class I; KEGG: mxa:MXAN_5539 cytochrome c oxidase, cbb3- type, subunit III. (271 aa)    
Predicted Functional Partners:
Slin_3562
KEGG: mxa:MXAN_5541 cytochrome c oxidase, cbb3- type, subunit I/II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 0.999
Slin_3559
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: hypothetical protein.
  
 0.961
Slin_5670
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.948
Slin_4943
KEGG: mes:Meso_2476 cytochrome c oxidase, subunit III.
  
 0.942
Slin_5674
PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMc01984 cytochrome-C oxidase transmembrane protein.
  
 0.942
Slin_5675
PFAM: cytochrome c oxidase subunit III; KEGG: lch:Lcho_0251 cytochrome c oxidase subunit III.
  
 0.942
Slin_2167
PFAM: cytochrome c oxidase subunit I; KEGG: bur:Bcep18194_C7361 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family.
  
 0.931
Slin_3734
PFAM: cytochrome c oxidase subunit I; KEGG: bur:Bcep18194_C7361 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family.
  
 0.931
Slin_5671
PFAM: cytochrome c oxidase subunit I; KEGG: bur:Bcep18194_C7361 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family.
  
 0.931
Slin_5676
KEGG: rso:RS02124 hypothetical protein.
  
  
  0.924
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.