STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3587KEGG: hypothetical protein. (1087 aa)    
Predicted Functional Partners:
Slin_0659
Hypothetical protein.
  
 
 
 0.775
Slin_5110
Hypothetical protein.
  
 
 
 0.766
Slin_5349
Hypothetical protein.
  
     0.766
Slin_0445
Hypothetical protein.
  
     0.763
Slin_0996
Hypothetical protein; KEGG: nis:NIS_1418 glycosyl transferase.
  
     0.754
Slin_5618
KEGG: hypothetical protein.
 
 
   0.751
Slin_0572
KEGG: hypothetical protein.
  
    0.747
Slin_1445
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
  
 0.745
Slin_0295
Hypothetical protein.
  
     0.744
Slin_4388
KEGG: hypothetical protein LOC679314.
  
    0.742
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.