STRINGSTRING
Slin_3588 protein (Spirosoma linguale) - STRING interaction network
"Slin_3588" - FAD dependent oxidoreductase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3588FAD dependent oxidoreductase (354 aa)    
Predicted Functional Partners:
Slin_3587
Hypothetical protein (1087 aa)
 
          0.737
Slin_2266
Alanine racemase (835 aa)
   
   
  0.711
Slin_4280
Hypothetical protein (108 aa)
   
          0.706
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
   
 
  0.693
Slin_4488
Hypothetical protein (223 aa)
 
 
      0.661
Slin_5545
Hypothetical protein (165 aa)
   
          0.636
cmk
Cytidylate kinase (233 aa)
   
      0.630
Slin_3223
Gliding motility-associated protein GldM (528 aa)
 
          0.612
Slin_3224
Gliding motility-associated protein GldL (272 aa)
 
          0.606
Slin_5874
Hypothetical protein (245 aa)
   
          0.593
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (7%) [HD]