STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3667PFAM: major royal jelly protein; KEGG: gme:Gmet_2448 hypothetical protein. (343 aa)    
Predicted Functional Partners:
Slin_0433
PFAM: ThiJ/PfpI domain protein; KEGG: bcj:BCAM2110 putative exported Pfp1 family protein.
 
 
    0.632
Slin_3665
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: scl:sce5495 alcohol dehydrogenase.
  
    0.551
Slin_3666
PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase; KEGG: geo:Geob_0283 cyclase/dehydrase.
       0.542
Slin_4243
KEGG: mxa:MXAN_0161 hypothetical protein.
  
    0.498
Slin_3669
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: mch:Mchl_3368 alcohol dehydrogenase GroES domain protein.
  
    0.491
Slin_3668
KEGG: mch:Mchl_3369 hypothetical protein.
       0.487
Slin_6571
PFAM: Ig family protein; NHL repeat containing protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: lch:Lcho_3739 outer membrane adhesin like proteiin.
  
     0.459
Slin_2005
KEGG: geo:Geob_0289 putative outer membrane protein.
  
     0.410
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.