STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3675Nucleic acid-binding protein contains PIN domain- like protein; KEGG: mpt:Mpe_A3449 hypothetical protein. (137 aa)    
Predicted Functional Partners:
Slin_3676
Hypothetical protein.
       0.773
Slin_5532
KEGG: rpa:RPA2819 hypothetical protein.
  
   
 0.611
Slin_1154
PFAM: protein of unknown function DUF433; KEGG: rpe:RPE_2627 protein of unknown function DUF433.
  
   
 0.555
Slin_0414
PFAM: protein of unknown function DUF820; KEGG: noc:Noc_2546 hypothetical protein.
  
     0.545
Slin_0491
KEGG: psa:PST_3436 hypothetical protein.
  
     0.537
Slin_1011
KEGG: scl:sce1131 hypothetical protein.
  
     0.514
Slin_1012
PFAM: protein of unknown function UPF0175; KEGG: scl:sce5011 hypothetical protein.
  
     0.486
Slin_4050
PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: amc:MADE_00119 type III restriction enzyme, res subunit.
  
     0.482
Slin_0051
KEGG: scl:sce5012 hypothetical protein.
  
     0.473
Slin_0052
PFAM: protein of unknown function UPF0175; KEGG: scl:sce5011 hypothetical protein.
  
     0.467
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.