STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3784KEGG: tgr:Tgr7_2760 tellurite resistance protein TehB, putative. (217 aa)    
Predicted Functional Partners:
Slin_3785
PFAM: major facilitator superfamily MFS_1; KEGG: rec:RHECIAT_CH0002252 putative transporter protein.
       0.534
Slin_3786
KEGG: slo:Shew_0422 hypothetical protein.
       0.529
Slin_0633
Polynucleotide 5'-hydroxyl-kinase; KEGG: yen:YE1682 hypothetical protein.
   
   0.454
Slin_1982
KEGG: glo:Glov_2141 hypothetical protein.
   
   0.454
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.