STRINGSTRING
Slin_3785 protein (Spirosoma linguale) - STRING interaction network
"Slin_3785" - Major facilitator superfamily protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3785Major facilitator superfamily protein (462 aa)    
Predicted Functional Partners:
Slin_3786
Hypothetical protein (163 aa)
              0.859
Slin_4410
Secretion protein HlyD (370 aa)
 
   
  0.706
Slin_2691
Secretion protein HlyD (369 aa)
 
   
  0.697
Slin_3787
AraC family transcriptional regulator (287 aa)
   
   
  0.638
Slin_3784
Tellurite resistance protein TehB (217 aa)
              0.586
Slin_0891
Family 2 glycosyl transferase (257 aa)
       
      0.483
Slin_6590
NodT family RND efflux system outer membrane lipoprotein (484 aa)
     
 
  0.463
Slin_5197
NodT family RND efflux system outer membrane lipoprotein (492 aa)
     
 
  0.463
Slin_2949
NodT family RND efflux system outer membrane lipoprotein (476 aa)
     
 
  0.463
Slin_0820
NodT family RND efflux system outer membrane lipoprotein (475 aa)
     
 
  0.463
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]