STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3930PFAM: protein of unknown function DUF162; KEGG: ank:AnaeK_3067 protein of unknown function DUF162. (194 aa)    
Predicted Functional Partners:
Slin_3931
PFAM: protein of unknown function DUF162; KEGG: acp:A2cp1_3174 protein of unknown function DUF162.
 
 
 0.997
Slin_3932
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: bmj:BMULJ_05705 putative Fe-S oxidoreductase.
 
 
 0.982
Slin_4649
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_1924 FAD linked oxidase-like.
  
 
 0.762
Slin_5063
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_1924 FAD linked oxidase-like.
  
 
 0.762
Slin_5543
KEGG: geo:Geob_1809 protein of unknown function DUF224 cysteine-rich region domain protein.
  
 
 0.688
Slin_5544
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: afw:Anae109_0009 hypothetical protein.
  
 
 0.688
Slin_2911
Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+))., Phosphate acetyltransferase; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: gsu:GSU1700 malic enzyme.
  
  
 0.671
Slin_4693
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.502
Slin_4773
PFAM: cytochrome c class I; KEGG: tbd:Tbd_2726 cytochrome c transmembrane protein.
  
     0.471
Slin_2351
KEGG: sat:SYN_01010 type I secretion outer membrane protein.
  
     0.434
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.