STRINGSTRING
Slin_3952 protein (Spirosoma linguale) - STRING interaction network
"Slin_3952" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3952Hypothetical protein (327 aa)    
Predicted Functional Partners:
Slin_3953
Quinoprotein glucose dehydrogenase (747 aa)
 
          0.833
Slin_6152
Hypothetical protein (418 aa)
   
          0.761
Slin_3405
Hypothetical protein (565 aa)
   
          0.742
Slin_1264
Xylose isomerase (274 aa)
   
          0.725
Slin_3954
2-keto-3-deoxy-galactonokinase (334 aa)
              0.719
Slin_4026
Xylose isomerase (311 aa)
   
          0.718
Slin_2260
Hypothetical protein (319 aa)
   
          0.703
Slin_6613
Hypothetical protein (433 aa)
   
          0.700
Slin_1069
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate (375 aa)
   
          0.687
Slin_4581
Hypothetical protein (494 aa)
   
          0.686
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]