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Slin_3966 protein (Spirosoma linguale) - STRING interaction network
"Slin_3966" - Glucose/sorbosone dehydrogenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3966Glucose/sorbosone dehydrogenase (601 aa)    
Predicted Functional Partners:
Slin_3562
Cytochrome C oxidase cbb3-type subunit I (736 aa)
   
  0.994
Slin_3203
Gluconolactonase (342 aa)
         
    0.900
Slin_2519
Gluconolactonase (545 aa)
         
    0.900
Slin_3967
Endoribonuclease L-PSP (156 aa)
              0.787
Slin_3965
Amidohydrolase (414 aa)
 
          0.726
Slin_3968
L-seryl-tRNA(ser) selenium transferase protein (406 aa)
 
          0.698
Slin_3969
Amidohydrolase (427 aa)
 
          0.643
Slin_3964
Pyridoxal phosphate-dependent enzyme (407 aa)
 
          0.624
Slin_0137
Kelch repeat-containing protein (1656 aa)
   
          0.587
Slin_4733
Hypothetical protein (506 aa)
   
          0.556
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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