STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3975Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: sde:Sde_3037 glycosyl hydrolase. (605 aa)    
Predicted Functional Partners:
Slin_3356
Chitinase; KEGG: hch:HCH_04793 chitinase; PFAM: glycoside hydrolase family 18; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.782
Slin_6046
PFAM: D-aminoacylase domain protein; amidohydrolase; Amidohydrolase 3; KEGG: geo:Geob_0285 N-acyl-D-aspartate deacylase.
      0.775
Slin_2268
Chitinase; KEGG: cja:CJA_1182 endo-chitinase, putative, chi18A; PFAM: glycoside hydrolase family 18; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.773
Slin_2630
PFAM: N-acylglucosamine 2-epimerase; KEGG: hypothetical protein; K01787 N- acylglucosamine 2-epimerase.
    
  0.652
Slin_5917
N-acyl-D-glucosamine 2-epimerase-like protein; KEGG: hypothetical protein; K01787 N- acylglucosamine 2-epimerase.
    
  0.652
Slin_6586
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; glycoside hydrolase family 20 domain protein; KEGG: hch:HCH_04791 N-acetyl-beta-hexosaminidase.
  
  
 
0.627
Slin_1285
Beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; glycoside hydrolase family 20 domain protein; Beta-N- acetylhexosaminidase-like; KEGG: hch:HCH_04791 N-acetyl-beta-hexosaminidase.
  
  
 
0.626
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.565
Slin_3893
Beta-N-acetylhexosaminidase; KEGG: sde:Sde_3037 glycosyl hydrolase; PFAM: Glycoside hydrolase, family 20, catalytic core; PA14 domain protein; SMART: PA14 domain protein.
  
  
 
0.563
Slin_3974
Hypothetical protein.
       0.550
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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