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Slin_4014 protein (Spirosoma linguale) - STRING interaction network
"Slin_4014" - PilT protein domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4014PilT protein domain-containing protein (137 aa)    
Predicted Functional Partners:
Slin_4015
Hypothetical protein (87 aa)
              0.859
Slin_6219
PilT protein domain-containing protein (129 aa)
   
          0.717
vapC
PilT protein domain-containing protein; Toxic component of a toxin-antitoxin (TA) module. An RNase (130 aa)
   
          0.659
Slin_1011
Hypothetical protein (153 aa)
 
          0.585
Slin_0051
Hypothetical protein (151 aa)
 
          0.505
Slin_4016
Carboxylesterase type B (551 aa)
              0.497
Slin_3651
PilT protein domain-containing protein (136 aa)
   
          0.480
Slin_2499
XRE family transcriptional regulator (101 aa)
 
     
  0.474
Slin_4956
PilT protein domain-containing protein (132 aa)
   
          0.461
Slin_3434
Hypothetical protein (78 aa)
   
     
  0.453
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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