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Slin_4080 protein (Spirosoma linguale) - STRING interaction network
"Slin_4080" - Family 2 glycosyl transferase in Spirosoma linguale
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4080Family 2 glycosyl transferase (401 aa)    
Predicted Functional Partners:
Slin_5852
Hypothetical protein (623 aa)
   
          0.775
Slin_5644
Geranylgeranylglyceryl phosphate synthase (249 aa)
   
          0.766
Slin_0248
O-methyltransferase-like protein (259 aa)
   
          0.759
Slin_2239
Hypothetical protein (333 aa)
   
          0.727
tgt
Queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (376 aa)
              0.707
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA (209 aa)
              0.703
Slin_0807
PpiC-type peptidyl-prolyl cis-trans isomerase (797 aa)
   
          0.663
Slin_5676
Hypothetical protein (107 aa)
   
          0.615
Slin_5927
Hypothetical protein (168 aa)
   
          0.600
Slin_3443
Hypothetical protein (952 aa)
   
          0.591
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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