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Slin_4097 protein (Spirosoma linguale) - STRING interaction network
"Slin_4097" - OmpA/MotB domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4097OmpA/MotB domain-containing protein (285 aa)    
Predicted Functional Partners:
Slin_4096
Hypothetical protein (164 aa)
              0.873
Slin_4095
Hypothetical protein (71 aa)
              0.859
Slin_4945
OmpA/MotB domain-containing protein (813 aa)
   
          0.763
Slin_1311
OmpA/MotB domain-containing protein (757 aa)
   
          0.761
Slin_3584
OmpA/MotB domain-containing protein (798 aa)
   
          0.751
Slin_4006
OmpA/MotB domain-containing protein (145 aa)
   
          0.747
Slin_1912
Periplasmic component of the Tol biopolymer transport system-like protein (512 aa)
   
 
  0.746
Slin_5203
OmpA/MotB domain-containing protein (668 aa)
   
          0.746
Slin_4098
Hypothetical protein (428 aa)
              0.728
Slin_2568
Ligand-binding protein (812 aa)
   
    0.674
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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