STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4125PFAM: heat shock protein DnaJ domain protein; KEGG: ses:SARI_02371 hypothetical protein. (247 aa)    
Predicted Functional Partners:
Slin_2640
Hypothetical protein.
    
 0.760
Slin_4124
KEGG: cja:CJA_1113 hypothetical protein.
       0.697
Slin_4126
KEGG: bps:BPSL0569 hypothetical protein.
  
  
 0.689
Slin_4127
Hypothetical protein.
  
   0.689
Slin_4128
Serine/threonine protein kinase; PFAM: aminoglycoside phosphotransferase; KWG Leptospira repeat protein; KEGG: geo:Geob_0055 KWG repeat protein.
  
  
 0.667
Slin_4159
PFAM: FRG domain protein; KEGG: ppd:Ppro_2922 hypothetical protein.
    
  0.606
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.606
Slin_1233
PFAM: alanine racemase domain protein; KEGG: hypothetical protein.
   
    0.535
Slin_4123
KEGG: cja:CJA_1112 hypothetical protein.
       0.535
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 
 0.405
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.