STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4154Cyanophycinase; KEGG: csa:Csal_1113 cyanophycinase; TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E; Belongs to the peptidase S51 family. (279 aa)    
Predicted Functional Partners:
Slin_4152
TIGRFAM: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; RimK domain protein ATP-grasp; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP- grasp; KEGG: csa:Csal_1114 cyanophycin synthetase; Belongs to the MurCDEF family.
 
   
 0.844
Slin_4208
KEGG: nmu:Nmul_A1900 cyanophycinase-like protein; Belongs to the peptidase S51 family.
 
     0.768
Slin_4153
Cyanophycinase; KEGG: csa:Csal_1113 cyanophycinase; TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E; Belongs to the peptidase S51 family.
 
    
0.582
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.