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Slin_4190 protein (Spirosoma linguale) - STRING interaction network
"Slin_4190" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4190Hypothetical protein (395 aa)    
Predicted Functional Partners:
Slin_4529
Hypothetical protein (390 aa)
   
          0.581
Slin_4910
2OG-Fe(II) oxygenase (203 aa)
   
          0.561
Slin_6285
anti-FecI sigma factor FecR (333 aa)
   
          0.538
Slin_0760
Hypothetical protein (151 aa)
   
          0.527
Slin_1219
anti-FecI sigma factor FecR (333 aa)
   
          0.522
Slin_1928
Hypothetical protein (206 aa)
   
          0.483
Slin_4395
Stress responsive alpha-beta barrel domain-containing protein (99 aa)
   
          0.471
Slin_0488
Stress responsive alpha-beta barrel domain-containing protein (133 aa)
   
          0.469
Slin_3719
Outer membrane efflux protein (444 aa)
   
          0.461
Slin_0105
anti-FecI sigma factor FecR (339 aa)
   
          0.456
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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