STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4230Hypothetical protein. (327 aa)    
Predicted Functional Partners:
Slin_4231
PFAM: Lantibiotic dehydratase domain protein.
 
  
 0.955
Slin_4228
PFAM: Lanthionine synthetase C family protein; KEGG: mxa:MXAN_2857 putative lantibiotic modification protein.
 
   
 0.740
Slin_2131
PFAM: Lantibiotic dehydratase domain protein; KEGG: hypothetical protein.
  
     0.633
Slin_0903
PFAM: Lantibiotic dehydratase domain protein; KEGG: hypothetical protein.
  
     0.599
Slin_4704
PFAM: Lantibiotic dehydratase domain protein; KEGG: hypothetical protein.
  
     0.596
Slin_4714
PFAM: Lantibiotic dehydratase domain protein; KEGG: hypothetical protein.
  
     0.553
Slin_4232
KEGG: hypothetical protein.
 
     0.546
Slin_4705
PFAM: Lanthionine synthetase C family protein.
 
   
 0.529
Slin_2116
PFAM: monooxygenase FAD-binding; KEGG: cak:Caul_0549 monooxygenase FAD-binding.
  
    0.510
Slin_3791
PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mll6746 pristinamycin I synthase 3.
 
 
 
 0.506
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.