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Slin_4230 protein (Spirosoma linguale) - STRING interaction network
"Slin_4230" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4230Hypothetical protein (327 aa)    
Predicted Functional Partners:
Slin_4231
Lantibiotic dehydratase domain-containing protein (962 aa)
 
          0.968
Slin_3244
Hypothetical protein (113 aa)
   
          0.553
Slin_4704
Lantibiotic dehydratase domain-containing protein (1060 aa)
   
          0.519
Slin_0903
Lantibiotic dehydratase domain-containing protein (1036 aa)
   
          0.503
Slin_2131
Lantibiotic dehydratase domain-containing protein (1013 aa)
   
          0.497
Slin_4714
Lantibiotic dehydratase domain-containing protein (1055 aa)
   
          0.484
Slin_4232
Hypothetical protein (341 aa)
              0.471
Slin_4705
Lanthionine synthetase C family protein (414 aa)
   
          0.460
Slin_3241
N-acetyltransferase GCN5 (150 aa)
   
          0.408
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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