STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4282Hypothetical protein. (432 aa)    
Predicted Functional Partners:
Slin_6621
KEGG: hypothetical protein.
  
 
   0.970
Slin_6454
Hypothetical protein.
  
     0.773
Slin_5950
Hypothetical protein; KEGG: mmw:Mmwyl1_0481 filamentous haemagglutinin outer membrane protein.
  
   
 0.770
Slin_3219
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: hypothetical protein.
  
     0.766
Slin_3226
TIGRFAM: putative membrane protein.
  
     0.765
Slin_6385
Hypothetical protein; KEGG: gur:Gura_2036 fibronectin, type III domain- containing protein.
  
     0.756
Slin_3080
PFAM: protein of unknown function DUF490; KEGG: bcs:BCAN_A0050 hypothetical protein.
  
     0.746
Slin_4895
TIGRFAM: gliding motility-associated lipoprotein GldD.
  
     0.742
Slin_3223
TIGRFAM: gliding motility-associated protein GldM.
  
     0.738
Slin_3224
TIGRFAM: gliding motility-associated protein GldL; KEGG: hypothetical protein.
  
     0.738
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.