STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4298Hypothetical protein. (160 aa)    
Predicted Functional Partners:
Slin_4297
KEGG: hypothetical protein.
       0.773
Slin_4299
Hypothetical protein.
       0.559
Slin_4300
Hypothetical protein.
       0.559
Slin_4301
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: similar to alpha-1 type VII collagen.
       0.501
Slin_4295
KEGG: hch:HCH_03784 rhs family protein.
       0.481
Slin_4296
Hypothetical protein.
       0.481
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.