STRINGSTRING
Slin_4487 protein (Spirosoma linguale) - STRING interaction network
"Slin_4487" - Thioredoxin in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4487Thioredoxin (196 aa)    
Predicted Functional Partners:
Slin_4465
Hypothetical protein (199 aa)
   
          0.604
Slin_1077
Hypothetical protein (176 aa)
   
          0.602
Slin_1599
ATP-dependent Clp protease adaptor protein ClpS (92 aa)
   
          0.577
Slin_3259
Crp/Fnr family transcriptional regulator (194 aa)
   
          0.569
Slin_4488
Hypothetical protein (223 aa)
              0.560
Slin_6626
Hypothetical protein (173 aa)
   
          0.542
Slin_4486
Endothelin-converting enzyme 1 (673 aa)
              0.539
Slin_5948
Hypothetical protein (204 aa)
   
          0.536
Slin_5545
Hypothetical protein (165 aa)
   
          0.533
Slin_3613
Hypothetical protein (175 aa)
   
          0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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