STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4490KEGG: pat:Patl_1102 hypothetical protein. (843 aa)    
Predicted Functional Partners:
Slin_2535
PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: sml:Smlt0603 putative peptidase M14, carboxypeptidase A precursor.
  
     0.714
Slin_5309
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ilo:IL2101 amidohydrolase.
  
     0.698
Slin_0262
KEGG: amc:MADE_02647 Xaa-Pro aminopeptidase family enzyme.
  
     0.603
Slin_3251
PFAM: peptidase S10 serine carboxypeptidase; KEGG: amc:MADE_01964 serine carboxypeptidase.
  
     0.501
Slin_0733
PFAM: natural resistance-associated macrophage protein; KEGG: amc:MADE_01595 putative manganese/divalent cation transport protein (NRAMP family).
  
     0.490
Slin_4489
Hypothetical protein.
       0.485
Slin_1062
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: saz:Sama_0087 amidohydrolase.
  
     0.481
Slin_4900
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: amc:MADE_01526 glycosyl hydrolase, BNR repeat- containing protein.
  
     0.459
Slin_1772
Amidohydrolase; KEGG: ilo:IL1716 amidohydrolase.
  
     0.455
Slin_5739
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: ilo:IL0517 acylaminoacyl-peptidase.
  
     0.450
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.